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LYFE SCIENCES
Project: HERA
SF3B1:SF3B1
ACMG/AMP
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Legacy Engine
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Classification rationale
1

A specific SF3B1 sequence change was not resolved, so this case could not be linked to variant-specific somatic observations or germline disease database entries.

2

Population evidence could not be assessed because no genomic coordinates or allele frequency data were available for comparison with ACMG/AMP frequency thresholds.

3

No variant-specific functional studies were identified, and generic PVS1 could not be applied because both the exact variant consequence and gene-level loss-of-function eligibility remained unresolved.

pvs1_generic_framework ↗
4

In silico evidence could not be assessed because no resolvable variant was available for SpliceAI, REVEL, BayesDel, or same-residue PM5 comparison.

Applied criteria
Met
Not met
Not assessed
N/A
Very strong
Strong
Moderate
Supporting
Pathogenic evidence
PVS
PVS1
PS
PS1
PS2
PS3
PS4
PM
PM1
PM2
PM3
PM4
PM5
PM6
PP
PP1
PP2
PP3
PP4
PP5
Benign evidence
BA
BA1
BS
BS1
BS2
BS3
BS4
BP
BP1
BP2
BP3
BP4
BP5
BP6
BP7
PVS1
Rationale
Select a criterion to inspect its explanation.
Evidence used
Gaps remaining
Rule
Publications
Research and evidence
01
Population
gnomAD v2.1Available
gnomAD v4.1Available
02
ClinVar
No ClinVar summary recorded.
03
Functional
No functional summary recorded.
04
In silico
No in silico summary recorded.
05
COSMIC
No COSMIC summary recorded.
06
Cancer hotspots
No cancer hotspot summary recorded.