gnomAD Canada v1.0 · HostSeq
NM_007294.4:c.80+5G>C
NP_009225.1:p.?  ·  BRCA1
GRCh38
chr17:43124012 C>G
GRCh37
chr17:41276029 C>G
rsID
Type
SNV
Allele type
Cohort
HostSeq (10,487 genomes)
Flags
PASS
Allele frequency
No data
not in gnomAD Canada v1.0
Not found
Variant not in gnomAD Canada
gnomAD Canada v1.0 · HostSeq

NM_007294.4:c.80+5G>C was not found in the gnomAD Canada v1.0 HostSeq dataset. This may mean the variant was not observed in this Canadian cohort, or that gnomAD Canada data was not available when this case was processed.

Allele count
not observed
Allele number
no genotype data
Cohort size
10,487
HostSeq genomes
Dataset
v1.0
gnomAD Canada
Absence from gnomAD Canada does not indicate pathogenicity. The HostSeq cohort is a Canadian whole-genome dataset of 10,487 individuals — rare or population-specific variants may not appear. Consult gnomAD global datasets for broader frequency data.
Back to variant report gnomAD v4.1 — global gnomAD v2.1
About gnomAD Canada v1.0
Dataset
gnomAD Canada v1.0
Cohort
HostSeq
Data type
Whole genome
Reference genome
GRCh38
Total genomes
10,487
Official browser
Data attribution
gnomAD Canada v1.0 · HostSeq / BCGSC
LYFE Sciences is an independent display tool. gnomAD Canada v1.0 data is produced by the BC Genome Sciences Centre (BCGSC) from the HostSeq cohort. Official browser: gnomad.ca · bcgsc.ca/gnomad.
Do not relabel gnomAD-Canada populations.
Key references
1
Yoo S et al. HostSeq: a Canadian whole genome sequencing and clinical data resource. BMC Genom Data. 2023. doi:10.1186/s12863-023-01128-3
2
Chen S*, Francioli LC* et al. A genomic mutational constraint map using variation in 76,156 human genomes. Nature. 625, 92–100 (2024). doi:10.1038/s41586-023-06045-0