PM2
supporting
Pathogenic
Met (supporting): gnomAD v4.1 allele frequency 1.86e-06 (3/1,614,156 alleles), well below the <0.003% PM2 threshold.
ClinGen TP53 VCEP v2.4 PM2 rule (cspec): apply at supporting level when allele frequency is < 0.00003 (0.003%) in gnomAD or another large sequenced population; if multiple alleles are present within any genetic ancestry group, the group AF must be < 0.00004 (0.004%); founder-effect groups (Ashkenazi Jewish, Finnish, Amish, Middle Eastern, 'Remaining') are ignored.gnomAD v4.1 (17-7673684-T-C): total AF 1.85856e-06 (0.000186%; 3/1,614,156 alleles), 0 homozygotes; European non-Finnish is the only non-excluded group with >= 2 alleles (2/1,180,044; AF 1.69485e-06, 0.000169%, below 0.004%); Remaining individuals (1/62,506; AF 1.59985e-05) is excluded by rule; grpmax FAF 2.8e-07.gnomAD v2.1 (17-7577002-T-C) and gnomAD-Canada v1.0: variant absent, consistent with extreme rarity.