PVS1 very strong: the exon 4 nonsense variant truncates TP53 at codon 68, upstream of p.Lys351, with predicted nonsense-mediated decay.
TP53 encodes the p53 tumor suppressor protein, a transcription factor that responds to cellular stress such as DNA damage by switching on genes that trigger cell cycle arrest, DNA repair, senescence, or programmed cell death. In healthy cells, p53 is kept at low levels by constant degradation, but stress signals stabilize and activate it to protect against damaged cells surviving and dividing. Inherited mutations in TP53 cause Li-Fraumeni syndrome, a condition marked by a high risk of developing multiple cancers at a young age. TP53 is the most commonly mutated gene across human cancers, and loss of its normal function promotes tumor growth, spread, drug resistance, and genomic instability.
This TP53 truncating variant is relevant to Li-Fraumeni syndrome because inherited TP53 loss of function impairs the p53 tumor-suppressor response to cellular stress and increases risk for multiple early-onset cancers.
PVS1 very strong: the exon 4 nonsense variant truncates TP53 at codon 68, upstream of p.Lys351, with predicted nonsense-mediated decay.