PM2
supporting
Pathogenic
Met (Supporting): gnomAD v4.1 total allele frequency is 1.86e-06 (3/1,613,960 alleles), far below the 0.00003 VCEP ceiling.
The TP53 VCEP Version 2.4 PM2 rule applies at supporting level when the allele frequency is <0.00003 (0.003%) in gnomAD or another large sequenced population; if multiple alleles are present within any genetic ancestry group, that group's frequency must be <0.00004 (0.004%); founder-effect genetic ancestry groups are ignored, and the most recent gnomAD should generally be used.gnomAD v4.1 reports 3 variant alleles among 1,613,960 total alleles (AF 1.85878e-06, below 0.00003), with 2 alleles in South Asian at AF 2.19635e-05 (2/91,060, below 0.00004) and 1 allele in European (non-Finnish) at AF 8.47551e-07 (1/1,179,870); zero homozygotes and grpmax FAF 3.65e-06.gnomAD v2.1 corroborates extreme rarity: total AF 3.98483e-06 (1/250,952 alleles), highest ancestry AF 3.26968e-05 (1/30,584 South Asian alleles, below 0.00004), zero homozygotes.